Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCNA2P20248 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.35□□□□□ -0.27
CCNA2P20248 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCNA2P20248 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCNA2P20248 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCNA2P20248 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCNA2P20248 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.35□□□□□ -0.27
CCNA2P20248 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.35□□□□□ -0.27
CCNA2P20248 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCNA2P20248 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.35□□□□□ -0.27
CCNA2P20248 TRIM80P-201ENST00000455685 2848 ntBASIC13.35□□□□□ -0.27
CCNA2P20248 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 AL355102.3-201ENST00000554299 1678 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 AC009474.1-201ENST00000455096 1565 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 MIR658-201ENST00000385210 100 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 AL391647.1-201ENST00000395664 511 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.34□□□□□ -0.27
CCNA2P20248 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 CNN2P10-201ENST00000443067 918 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.34□□□□□ -0.27
CCNA2P20248 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.34□□□□□ -0.27
CCNA2P20248 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.34□□□□□ -0.27
CCNA2P20248 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCNA2P20248 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 ZACNP1-201ENST00000612259 710 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 AP001002.3-201ENST00000623482 206 ntBASIC13.34□□□□□ -0.27
CCNA2P20248 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.34□□□□□ -0.27
CCNA2P20248 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCNA2P20248 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCNA2P20248 AC022400.8-201ENST00000623453 3599 ntBASIC13.33□□□□□ -0.27
CCNA2P20248 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCNA2P20248 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCNA2P20248 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.33□□□□□ -0.27
CCNA2P20248 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CCNA2P20248 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCNA2P20248 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCNA2P20248 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CCNA2P20248 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CCNA2P20248 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 AL136309.1-201ENST00000403917 691 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNA2P20248 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 HIST2H2BB-201ENST00000449108 381 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNA2P20248 CICP12-201ENST00000455801 843 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.33□□□□□ -0.28
CCNA2P20248 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNA2P20248 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNA2P20248 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNA2P20248 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNA2P20248 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNA2P20248 AC133552.6-201ENST00000613406 534 ntBASIC13.33□□□□□ -0.28
CCNA2P20248 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms