Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NFKB1P19838 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.27□□□□□ -0.12
NFKB1P19838 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NFKB1P19838 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NFKB1P19838 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 AC073869.2-201ENST00000417338 1026 ntBASIC14.27□□□□□ -0.13
NFKB1P19838 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.27□□□□□ -0.13
NFKB1P19838 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.27□□□□□ -0.13
NFKB1P19838 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 AL591122.2-201ENST00000624125 1853 ntBASIC14.27□□□□□ -0.13
NFKB1P19838 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.27□□□□□ -0.13
NFKB1P19838 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
NFKB1P19838 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.27□□□□□ -0.13
NFKB1P19838 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NFKB1P19838 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.27□□□□□ -0.13
NFKB1P19838 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 AC020917.4-201ENST00000623994 1999 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 BANF1P3-201ENST00000412556 261 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.26□□□□□ -0.13
NFKB1P19838 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 RN7SL11P-201ENST00000471305 293 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.26□□□□□ -0.13
NFKB1P19838 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 NDUFB10P1-201ENST00000567319 521 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 AL109837.1-201ENST00000603272 613 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 MIR6769A-201ENST00000617340 73 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 AC015967.2-201ENST00000624092 234 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 AL161773.1-201ENST00000624845 863 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 AC006435.4-201ENST00000625037 234 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.26□□□□□ -0.13
NFKB1P19838 AL356737.1-201ENST00000634391 234 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 AL139424.3-202ENST00000641619 917 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.26□□□□□ -0.13
NFKB1P19838 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.26□□□□□ -0.13
NFKB1P19838 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NFKB1P19838 AC108024.1-201ENST00000626286 1721 ntBASIC14.26□□□□□ -0.13
NFKB1P19838 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms