Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
H2BFMP0C1H6 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.45□□□□□ -0.42
H2BFMP0C1H6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 KRT8P29-201ENST00000420409 1371 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 COL6A4P2-202ENST00000504443 2753 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ANKRD19P-201ENST00000338192 862 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AL035633.1-201ENST00000406139 838 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 MIR1909-201ENST00000411312 80 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 MTX1P1-201ENST00000440904 838 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ACA64.2-201ENST00000459014 129 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 RPL18P13-201ENST00000478088 569 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AC010328.2-201ENST00000597698 1111 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 AL023803.2-201ENST00000620080 638 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 DGCR9-201ENST00000609630 2415 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SALL4P6-201ENST00000429385 1691 ntBASIC12.44□□□□□ -0.42
H2BFMP0C1H6 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2BFMP0C1H6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
H2BFMP0C1H6 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms