Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CD74P04233 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.81□□□□□ -0.52
CD74P04233 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 LINC00115-201ENST00000473798 1317 ntBASIC11.81□□□□□ -0.52
CD74P04233 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD74P04233 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD74P04233 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 AC022400.8-201ENST00000623453 3599 ntBASIC11.8□□□□□ -0.52
CD74P04233 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 AL645937.6-201ENST00000641122 3727 ntBASIC11.8□□□□□ -0.52
CD74P04233 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CD74P04233 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 MIR326-201ENST00000362220 95 ntBASIC11.8□□□□□ -0.52
CD74P04233 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.8□□□□□ -0.52
CD74P04233 METTL21AP1-201ENST00000438852 635 ntBASIC11.8□□□□□ -0.52
CD74P04233 ELK1P1-201ENST00000485699 580 ntBASIC11.8□□□□□ -0.52
CD74P04233 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.8□□□□□ -0.52
CD74P04233 RN7SL713P-201ENST00000582127 302 ntBASIC11.8□□□□□ -0.52
CD74P04233 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD74P04233 AC132192.2-201ENST00000596206 1147 ntBASIC11.8□□□□□ -0.52
CD74P04233 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.8□□□□□ -0.52
CD74P04233 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.8□□□□□ -0.52
CD74P04233 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.8□□□□□ -0.52
CD74P04233 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.8□□□□□ -0.52
CD74P04233 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD74P04233 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.8□□□□□ -0.52
CD74P04233 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CD74P04233 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CD74P04233 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD74P04233 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD74P04233 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.79□□□□□ -0.52
CD74P04233 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
CD74P04233 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 LINC00563-201ENST00000566370 1400 ntBASIC11.79□□□□□ -0.52
CD74P04233 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
CD74P04233 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.79□□□□□ -0.52
CD74P04233 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.79□□□□□ -0.52
CD74P04233 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD74P04233 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms