Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AC245369.8-201ENST00000636589 306 ntBASIC14.09□□□□□ -0.15
XIRP2A4UGR9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XIRP2A4UGR9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 SNORA30.1-201ENST00000363193 129 ntBASIC14.08□□□□□ -0.15
XIRP2A4UGR9 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 TULP3P1-202ENST00000453253 1291 ntBASIC14.08□□□□□ -0.15
XIRP2A4UGR9 PRDX2P3-201ENST00000515779 586 ntBASIC14.08□□□□□ -0.15
XIRP2A4UGR9 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
XIRP2A4UGR9 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 HNRNPA1P9-201ENST00000450624 950 ntBASIC14.08□□□□□ -0.16
XIRP2A4UGR9 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 RN7SL162P-201ENST00000579233 292 ntBASIC14.08□□□□□ -0.16
XIRP2A4UGR9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XIRP2A4UGR9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 TMEM256P1-201ENST00000430550 340 ntBASIC14.07□□□□□ -0.16
XIRP2A4UGR9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC023157.3-201ENST00000619086 2088 ntBASIC14.07□□□□□ -0.16
XIRP2A4UGR9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC016304.1-201ENST00000476363 413 ntBASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC104759.1-201ENST00000559109 939 ntBASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 AC091736.1-201ENST00000609370 305 ntBASIC14.07□□□□□ -0.16
XIRP2A4UGR9 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XIRP2A4UGR9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 AC113367.3-201ENST00000508316 1912 ntBASIC14.06□□□□□ -0.16
XIRP2A4UGR9 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC14.06□□□□□ -0.16
XIRP2A4UGR9 DNM1P50-201ENST00000565767 508 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms