Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 FMO6P-201ENST00000236166 1620 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AC005229.1-201ENST00000392885 409 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 FAM197Y7-201ENST00000432892 766 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 FAM207CP-201ENST00000443486 507 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 TSPY16P-201ENST00000449843 468 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 AC009955.4-201ENST00000597192 544 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 E2F3P2-201ENST00000447755 1422 ntBASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AL022323.5-201ENST00000624101 2059 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC008620.2-201ENST00000510294 1569 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CHMP1AP1-201ENST00000445563 662 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 RFPL4AP1-201ENST00000530883 850 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DUX4L46-201ENST00000566845 751 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC023511.2-201ENST00000618803 211 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AC138951.2-201ENST00000623455 1161 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms