Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ENPP7P14-201ENST00000621765 1040 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AL031719.1-201ENST00000623365 2587 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AGGF1P10-201ENST00000635005 2191 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
KCNIP3Q9Y2W7 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.83□□□□□ -0.51
KCNIP3Q9Y2W7 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 RN7SKP175-201ENST00000408472 289 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 HMGA1P1-201ENST00000415560 1062 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC093004.1-201ENST00000508850 424 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC005252.2-201ENST00000624630 1141 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC115284.2-201ENST00000624646 2054 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC007614.4-201ENST00000564048 1827 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KCNIP3Q9Y2W7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms