Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AQP7P4-201ENST00000447083 1042 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AQP7P2-201ENST00000453967 1041 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC008972.2-201ENST00000606587 494 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC026120.2-201ENST00000617239 309 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AQP7P3-201ENST00000624547 1041 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL23P-201ENST00000484055 275 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL818P-201ENST00000485099 259 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 KRT18P37-201ENST00000520711 1282 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AL359219.1-201ENST00000556311 934 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL725P-201ENST00000606439 259 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AL451007.2-201ENST00000632004 563 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC021305.1-201ENST00000520656 1514 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RPL35P9-201ENST00000446059 350 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC007279.1-201ENST00000448547 837 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL375P-201ENST00000492442 298 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 ALG1L3P-201ENST00000503331 765 ntBASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms