Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AC083964.2-201ENST00000623988 2396 ntBASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AL031595.1-201ENST00000623969 4709 ntBASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AC108024.1-201ENST00000626286 1721 ntBASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 AC008620.2-201ENST00000510294 1569 ntBASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPF3BQ9BZI7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AC009779.1-201ENST00000551138 283 ntBASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 LINC01165-201ENST00000445190 1623 ntBASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AC009474.1-201ENST00000455096 1565 ntBASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AL139158.3-201ENST00000641212 1562 ntBASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AL591122.2-201ENST00000624125 1853 ntBASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPF3BQ9BZI7 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 DPM3-202ENST00000368399 517 ntBASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 RN7SL163P-201ENST00000583100 276 ntBASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UPF3BQ9BZI7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms