Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NICN1Q9BSH3 AC010336.1-201ENST00000539278 4739 ntBASIC12.11□□□□□ -0.47
NICN1Q9BSH3 TNRC18P1-201ENST00000502875 3650 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC244394.1-201ENST00000435000 1665 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 POM121L14P-201ENST00000406100 1558 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC026271.4-201ENST00000578214 1833 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 CNN2P8-201ENST00000421872 913 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 TMEM14DP-201ENST00000422205 345 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 HIST2H2BB-201ENST00000449108 381 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SPCS2P1-201ENST00000561636 679 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 C2orf69P2-201ENST00000562032 1123 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC124068.2-201ENST00000569473 1109 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AL022328.1-201ENST00000610050 478 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC090386.2-201ENST00000623010 1039 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AL591163.1-201ENST00000641757 987 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 MSNP1-201ENST00000511640 1732 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 AC104758.3-203ENST00000562938 2123 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 DLX4-206ENST00000611342 1662 ntBASIC12.1□□□□□ -0.47
NICN1Q9BSH3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.1□□□□□ -0.47
NICN1Q9BSH3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 AC011481.3-201ENST00000623895 5594 ntBASIC12.09□□□□□ -0.47
NICN1Q9BSH3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 AC024075.2-201ENST00000598112 1473 ntBASIC12.09□□□□□ -0.47
NICN1Q9BSH3 AC025183.3-201ENST00000623526 1482 ntBASIC12.09□□□□□ -0.47
NICN1Q9BSH3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NICN1Q9BSH3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms