Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 FMO6P-201ENST00000236166 1620 ntBASIC14.26□□□□□ -0.13
SEMA3CQ99985 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.26□□□□□ -0.13
SEMA3CQ99985 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEMA3CQ99985 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC004554.1-201ENST00000422830 1468 ntBASIC14.25□□□□□ -0.13
SEMA3CQ99985 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC092978.1-202ENST00000637590 1327 ntBASIC14.25□□□□□ -0.13
SEMA3CQ99985 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 MIR557-201ENST00000385239 98 ntBASIC14.25□□□□□ -0.13
SEMA3CQ99985 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AL807761.2-201ENST00000422849 729 ntBASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AC007718.1-201ENST00000621078 280 ntBASIC14.25□□□□□ -0.13
SEMA3CQ99985 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.25□□□□□ -0.13
SEMA3CQ99985 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEMA3CQ99985 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA3CQ99985 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEMA3CQ99985 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms