Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC091046.1-201ENST00000331871 207 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 GUSBP10-201ENST00000417412 665 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC078991.1-201ENST00000437297 610 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC098935.1-201ENST00000446057 611 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 GRPEL2P1-201ENST00000453145 339 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MRPL22P1-201ENST00000505398 616 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 KLF17P1-201ENST00000547105 1126 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AP005264.5-201ENST00000590066 467 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC242376.2-201ENST00000619355 883 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 AC009145.4-201ENST00000625119 1294 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MEX3B-202ENST00000558133 4333 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 KRT8P18-201ENST00000413425 1445 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TBC1D27-202ENST00000424239 1573 ntBASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2E2Q96LR5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 RN7SL181P-201ENST00000462921 277 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 NUDT4P2-201ENST00000578341 546 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 KRT18P8-201ENST00000581937 1246 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 MIR4265-201ENST00000582152 99 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 CR392039.2-201ENST00000623182 509 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AL139424.3-202ENST00000641619 917 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 AC023908.3-201ENST00000564211 3047 ntBASIC10.88□□□□□ -0.67
UBE2E2Q96LR5 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms