Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 MIR326-201ENST00000362220 95 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 CSF2RBP1-201ENST00000447905 391 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 HIST2H2BB-201ENST00000449108 381 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AP005482.1-201ENST00000563722 1273 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC017083.2-201ENST00000608069 979 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AC133552.6-201ENST00000613406 534 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 CR383656.2-201ENST00000548656 2254 ntBASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTN4IP1Q8WWV3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.9□□□□□ -0.51
RTN4IP1Q8WWV3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RTN4IP1Q8WWV3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RTN4IP1Q8WWV3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AC099336.1-201ENST00000417053 1171 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 HLA-V-201ENST00000429037 534 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 YBX1P6-201ENST00000442962 1002 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AC022210.1-201ENST00000449856 793 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 MIR6805-201ENST00000615055 62 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CR392039.2-201ENST00000623182 509 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms