Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AF013593.1-201ENST00000458074 1487 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 RBMXP1-201ENST00000408004 1191 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 POLR2LP1-206ENST00000444785 187 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 MIR6125-201ENST00000618986 96 ntBASIC16.62■□□□□ 0.25
SNED1Q8TER0 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.62■□□□□ 0.25
SNED1Q8TER0 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNED1Q8TER0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 AL513497.1-201ENST00000624273 2083 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 CDKN2A-AS1-201ENST00000441769 823 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 RN7SL672P-201ENST00000474091 317 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 AC114812.4-201ENST00000506676 757 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNED1Q8TER0 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 EEF1DP7-201ENST00000580496 513 ntBASIC16.61■□□□□ 0.25
SNED1Q8TER0 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SNED1Q8TER0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AC245140.2-201ENST00000624054 1939 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 AC139749.1-202ENST00000617529 3139 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms