Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KRT8P43-201ENST00000406052 1458 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 RN7SL23P-201ENST00000484055 275 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC093909.3-201ENST00000504783 336 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 MIR4265-201ENST00000582152 99 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC091769.1-201ENST00000619576 568 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AL451007.2-201ENST00000632004 563 ntBASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHKBP1Q8TBC3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 SHMT1P1-201ENST00000419974 1312 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC108734.2-201ENST00000420887 1069 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 GNG10P1-201ENST00000452289 199 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 RN7SL375P-201ENST00000492442 298 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC093826.1-201ENST00000508655 993 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC141586.1-203ENST00000567242 366 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AL118522.1-201ENST00000611368 560 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 AC011471.3-201ENST00000623576 402 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHKBP1Q8TBC3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHKBP1Q8TBC3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 PDXDC2P-206ENST00000534700 1315 ntBASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.7□□□□□ -0.06
SHKBP1Q8TBC3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms