Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC50Q8IVM0 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AL035633.1-201ENST00000406139 838 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AL512310.5-201ENST00000551999 515 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AC008687.7-202ENST00000637404 953 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 Z98259.2-201ENST00000641583 609 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AC105233.6-201ENST00000642093 218 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AGAP12P-201ENST00000585227 2359 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 AP002761.4-201ENST00000565433 3361 ntBASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC50Q8IVM0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 HMGA1P1-201ENST00000415560 1062 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC012441.2-201ENST00000444843 739 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 MIR4741-201ENST00000579822 90 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 MIR4783-201ENST00000580343 82 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms