Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.93□□□□□ -0.02
RNF135Q8IUD6 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC022447.6-201ENST00000515522 438 ntBASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC068831.5-201ENST00000557387 328 ntBASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ACTG1P22-201ENST00000603793 1099 ntBASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RNF135Q8IUD6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 PYY2-201ENST00000315776 282 ntBASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms