Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 E2F3P2-201ENST00000447755 1422 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 LILRP1-201ENST00000444199 1370 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 RN7SL720P-201ENST00000488178 304 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 CHMP4BP1-201ENST00000556017 588 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC079328.1-201ENST00000560358 952 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC009955.4-201ENST00000597192 544 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AL136295.7-201ENST00000619226 1200 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC015967.2-201ENST00000624092 234 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC006435.4-201ENST00000625037 234 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC100757.4-201ENST00000626934 759 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 AL356737.1-201ENST00000634391 234 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC113367.3-201ENST00000508316 1912 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 TUBBP5-203ENST00000508529 1334 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RN7SKP230-201ENST00000365642 335 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC010141.1-201ENST00000411585 623 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 SLC16A6P1-201ENST00000413214 1059 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms