Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 AP000358.1-201ENST00000456260 156 ntBASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC39BQ5VTQ0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC006987.1-201ENST00000413610 527 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 HMGA1P1-201ENST00000415560 1062 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 CEP164P1-201ENST00000455142 418 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 RHOQP1-201ENST00000555758 579 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 MIR3677-201ENST00000578964 60 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 LINC00115-201ENST00000473798 1317 ntBASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC39BQ5VTQ0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms