Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 OR52M2P-201ENST00000414298 959 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 LUZP4P1-201ENST00000415420 344 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 IL12A-205ENST00000480787 863 ntTSL 3 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 LARP7P4-201ENST00000481075 878 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC084752.1-201ENST00000509766 622 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 OR8K4P-201ENST00000534608 872 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC226150.1-201ENST00000544259 466 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC068408.1-201ENST00000577406 1144 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 AC025183.3-201ENST00000623526 1482 ntBASIC14.94□□□□□ -0.02
VARS2Q5ST30 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARS2Q5ST30 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.94□□□□□ -0.02
VARS2Q5ST30 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 RPL3P2-204ENST00000413027 1203 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 RN7SL23P-201ENST00000484055 275 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 ELL2P2-201ENST00000515135 694 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC026407.1-201ENST00000518369 204 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 C2orf69P1-201ENST00000563532 1093 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 MIR5196-201ENST00000578146 115 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AF230666.2-201ENST00000602328 725 ntBASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VARS2Q5ST30 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARS2Q5ST30 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms