Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CERKLQ49MI3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CERKLQ49MI3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CERKLQ49MI3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CERKLQ49MI3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CERKLQ49MI3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 BPIFB5P-201ENST00000457066 1099 ntBASIC16.29■□□□□ 0.2
CERKLQ49MI3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 BAK1P2-201ENST00000532665 631 ntBASIC16.29■□□□□ 0.2
CERKLQ49MI3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 FMO6P-201ENST00000236166 1620 ntBASIC16.29■□□□□ 0.2
CERKLQ49MI3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 SNX18-202ENST00000343017 3140 ntBASIC16.29■□□□□ 0.2
CERKLQ49MI3 AC067750.1-201ENST00000608826 6545 ntBASIC16.29■□□□□ 0.2
CERKLQ49MI3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CERKLQ49MI3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CERKLQ49MI3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 Z98885.3-201ENST00000624882 1757 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 MIR1227-201ENST00000408484 88 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 KRT17P4-201ENST00000429445 819 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 ASS1P2-201ENST00000439895 1223 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 AC007279.1-201ENST00000448547 837 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 ALG1L3P-201ENST00000503331 765 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 AC010632.2-201ENST00000588369 1224 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 AC005357.2-202ENST00000590507 1060 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 MIR8071-1-201ENST00000616769 65 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 MIR8071-2-201ENST00000616772 65 ntBASIC16.28■□□□□ 0.2
CERKLQ49MI3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CERKLQ49MI3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CERKLQ49MI3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CERKLQ49MI3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CERKLQ49MI3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms