Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC061965.1-201ENST00000560524 1465 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 AC020931.1-201ENST00000589622 1346 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.79■□□□□ 0.12
CCNA1P78396 AC106827.1-201ENST00000366454 431 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 AC103563.1-201ENST00000429316 123 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 IFNWP2-201ENST00000431203 580 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.79■□□□□ 0.12
CCNA1P78396 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.79■□□□□ 0.12
CCNA1P78396 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.79■□□□□ 0.12
CCNA1P78396 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.79■□□□□ 0.12
CCNA1P78396 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 MEP1AP1-201ENST00000636082 1097 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA1P78396 NRADDP-202ENST00000641269 1585 ntBASIC15.79■□□□□ 0.12
CCNA1P78396 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCNA1P78396 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 OR7E155P-201ENST00000412208 1014 ntBASIC15.78■□□□□ 0.12
CCNA1P78396 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 CDCA4P4-201ENST00000435216 680 ntBASIC15.78■□□□□ 0.12
CCNA1P78396 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.78■□□□□ 0.12
CCNA1P78396 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.78■□□□□ 0.12
CCNA1P78396 AC026120.2-201ENST00000617239 309 ntBASIC15.78■□□□□ 0.12
CCNA1P78396 AC048382.6-201ENST00000621980 1223 ntBASIC15.78■□□□□ 0.12
CCNA1P78396 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.78■□□□□ 0.12
CCNA1P78396 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCNA1P78396 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCNA1P78396 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCNA1P78396 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.77■□□□□ 0.12
CCNA1P78396 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.77■□□□□ 0.12
CCNA1P78396 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCNA1P78396 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCNA1P78396 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CCNA1P78396 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCNA1P78396 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCNA1P78396 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCNA1P78396 RNA5SP491-201ENST00000362936 118 ntBASIC15.77■□□□□ 0.12
CCNA1P78396 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.77■□□□□ 0.12
CCNA1P78396 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.77■□□□□ 0.12
CCNA1P78396 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.77■□□□□ 0.12
CCNA1P78396 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.77■□□□□ 0.12
CCNA1P78396 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCNA1P78396 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.77■□□□□ 0.12
CCNA1P78396 VDAC1P11-201ENST00000458323 852 ntBASIC15.77■□□□□ 0.12
CCNA1P78396 AC112250.1-201ENST00000504640 745 ntBASIC15.77■□□□□ 0.12
CCNA1P78396 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.77■□□□□ 0.12
CCNA1P78396 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.77■□□□□ 0.12
CCNA1P78396 MIR2278-201ENST00000516344 96 ntBASIC15.77■□□□□ 0.12
CCNA1P78396 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.77■□□□□ 0.12
CCNA1P78396 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.77■□□□□ 0.12
CCNA1P78396 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms