Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 Z98885.3-201ENST00000624882 1757 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 KRT8P43-201ENST00000406052 1458 ntBASIC12.27□□□□□ -0.44
HIST1H3AP68431 AC004554.1-201ENST00000422830 1468 ntBASIC12.27□□□□□ -0.44
HIST1H3AP68431 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H3AP68431 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
HIST1H3AP68431 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.27□□□□□ -0.44
HIST1H3AP68431 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H3AP68431 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
HIST1H3AP68431 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H3AP68431 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 AL355102.3-201ENST00000554299 1678 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 KRT17P5-201ENST00000332088 839 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 RN7SL219P-201ENST00000582872 296 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 AC015909.3-201ENST00000572855 1794 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 AL358781.1-202ENST00000321081 1360 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 COL6A4P2-202ENST00000504443 2753 ntBASIC12.27□□□□□ -0.45
HIST1H3AP68431 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H3AP68431 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
HIST1H3AP68431 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 PPT1-213ENST00000641319 2388 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 DGCR9-201ENST00000609630 2415 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms