Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 NRADDP-202ENST00000641269 1585 ntBASIC12.52□□□□□ -0.4
GFRA1P56159 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
GFRA1P56159 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
GFRA1P56159 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
GFRA1P56159 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GFRA1P56159 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 RN7SKP155-201ENST00000516031 288 ntBASIC12.52□□□□□ -0.41
GFRA1P56159 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.52□□□□□ -0.41
GFRA1P56159 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.52□□□□□ -0.41
GFRA1P56159 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 AC105137.3-201ENST00000617588 984 ntBASIC12.52□□□□□ -0.41
GFRA1P56159 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 AL161773.1-201ENST00000624845 863 ntBASIC12.52□□□□□ -0.41
GFRA1P56159 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
GFRA1P56159 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 AC111170.3-201ENST00000624282 2464 ntBASIC12.52□□□□□ -0.41
GFRA1P56159 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GFRA1P56159 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.52□□□□□ -0.41
GFRA1P56159 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GFRA1P56159 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
GFRA1P56159 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
GFRA1P56159 DKKL1P1-201ENST00000400550 698 ntBASIC12.51□□□□□ -0.41
GFRA1P56159 GGTLC4P-201ENST00000402176 664 ntBASIC12.51□□□□□ -0.41
GFRA1P56159 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 AC006529.1-201ENST00000459978 637 ntBASIC12.51□□□□□ -0.41
GFRA1P56159 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.51□□□□□ -0.41
GFRA1P56159 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 AC093300.1-201ENST00000510368 1201 ntBASIC12.51□□□□□ -0.41
GFRA1P56159 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.51□□□□□ -0.41
GFRA1P56159 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms