Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CENPAP49450 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.87□□□□□ -0.35
CENPAP49450 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.87□□□□□ -0.35
CENPAP49450 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 KRT18P15-201ENST00000458108 1291 ntBASIC12.87□□□□□ -0.35
CENPAP49450 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.87□□□□□ -0.35
CENPAP49450 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.87□□□□□ -0.35
CENPAP49450 AC021016.3-201ENST00000608367 477 ntBASIC12.87□□□□□ -0.35
CENPAP49450 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.87□□□□□ -0.35
CENPAP49450 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 E2F3P2-201ENST00000447755 1422 ntBASIC12.87□□□□□ -0.35
CENPAP49450 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.86□□□□□ -0.35
CENPAP49450 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CENPAP49450 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 AC027020.2-201ENST00000602585 2389 ntBASIC12.86□□□□□ -0.35
CENPAP49450 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 COX5BP8-201ENST00000416911 349 ntBASIC12.86□□□□□ -0.35
CENPAP49450 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.86□□□□□ -0.35
CENPAP49450 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 NME2P1-201ENST00000426182 414 ntBASIC12.86□□□□□ -0.35
CENPAP49450 AC234783.1-201ENST00000441761 496 ntBASIC12.86□□□□□ -0.35
CENPAP49450 HIST2H2BB-201ENST00000449108 381 ntBASIC12.86□□□□□ -0.35
CENPAP49450 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.86□□□□□ -0.35
CENPAP49450 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.86□□□□□ -0.35
CENPAP49450 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 RBM8B-201ENST00000555532 525 ntBASIC12.86□□□□□ -0.35
CENPAP49450 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.86□□□□□ -0.35
CENPAP49450 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.86□□□□□ -0.35
CENPAP49450 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CENPAP49450 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PDIA3P1-201ENST00000471856 1510 ntBASIC12.86□□□□□ -0.35
CENPAP49450 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms