Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC175P0C221 PTPRVP-205ENST00000641549 5067 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC175P0C221 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC175P0C221 MIR326-201ENST00000362220 95 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC175P0C221 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC175P0C221 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC175P0C221 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC175P0C221 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC175P0C221 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC175P0C221 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC175P0C221 AL590640.2-201ENST00000457038 527 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 RBM8B-201ENST00000555532 525 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC175P0C221 AC124068.2-201ENST00000569473 1109 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC175P0C221 AC008494.3-201ENST00000606615 944 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 AL136301.1-201ENST00000615830 422 ntBASIC15.21■□□□□ 0.03
CCDC175P0C221 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC175P0C221 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC175P0C221 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC175P0C221 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC175P0C221 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC175P0C221 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC175P0C221 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC175P0C221 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC175P0C221 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC175P0C221 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.21■□□□□ 0.02
CCDC175P0C221 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC175P0C221 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 AL157407.1-201ENST00000435784 904 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC175P0C221 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC175P0C221 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 COX5BP1-201ENST00000507622 393 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 AC022217.1-201ENST00000521069 738 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 TDH-203ENST00000531764 1110 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC175P0C221 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 MIR5189-201ENST00000577370 114 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 GNRHR2-203ENST00000581100 1187 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC175P0C221 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 Z98885.3-201ENST00000624882 1757 ntBASIC15.2■□□□□ 0.02
CCDC175P0C221 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC175P0C221 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC175P0C221 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC175P0C221 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC175P0C221 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms