Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 CSPG4P11-201ENST00000560634 4910 ntBASIC10.91□□□□□ -0.66
CXCL1P09341 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CXCL1P09341 KRT18P13-201ENST00000400056 1290 ntBASIC10.91□□□□□ -0.66
CXCL1P09341 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC092865.5-201ENST00000545435 363 ntBASIC10.91□□□□□ -0.66
CXCL1P09341 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
CXCL1P09341 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC044860.1-202ENST00000559481 777 ntBASIC10.91□□□□□ -0.66
CXCL1P09341 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 AC003102.2-201ENST00000589195 1469 ntBASIC10.91□□□□□ -0.66
CXCL1P09341 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CXCL1P09341 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL1P09341 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL1P09341 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL1P09341 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CXCL1P09341 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 MAPK10-262ENST00000641051 5738 ntBASIC10.9□□□□□ -0.66
CXCL1P09341 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 REXO1L1P-201ENST00000379010 6598 ntBASIC10.9□□□□□ -0.66
CXCL1P09341 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CXCL1P09341 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.9□□□□□ -0.66
CXCL1P09341 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.9□□□□□ -0.66
CXCL1P09341 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CXCL1P09341 CNN2P2-201ENST00000443536 909 ntBASIC10.9□□□□□ -0.66
CXCL1P09341 CNN2P3-201ENST00000450201 906 ntBASIC10.9□□□□□ -0.66
CXCL1P09341 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.9□□□□□ -0.66
CXCL1P09341 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CXCL1P09341 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms