Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.83□□□□□ -0.04
TIMP1P01033 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.83□□□□□ -0.04
TIMP1P01033 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMP1P01033 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMP1P01033 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMP1P01033 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMP1P01033 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TIMP1P01033 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TIMP1P01033 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMP1P01033 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 AL031590.1-202ENST00000641466 1737 ntBASIC14.83□□□□□ -0.04
TIMP1P01033 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TIMP1P01033 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TIMP1P01033 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 HSPA7-201ENST00000445535 1927 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TIMP1P01033 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 AL137077.2-201ENST00000635124 1608 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TIMP1P01033 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
TIMP1P01033 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.82□□□□□ -0.04
TIMP1P01033 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.82□□□□□ -0.04
TIMP1P01033 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 CETN3-205ENST00000522842 664 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.82□□□□□ -0.04
TIMP1P01033 AC023824.1-201ENST00000562945 2975 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 TPST2P1-201ENST00000564073 1102 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.82□□□□□ -0.04
TIMP1P01033 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMP1P01033 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMP1P01033 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMP1P01033 AC113367.3-201ENST00000508316 1912 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 AC015813.5-201ENST00000624641 1514 ntBASIC14.82□□□□□ -0.04
TIMP1P01033 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 AC067930.6-201ENST00000623257 4947 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 DLX4-206ENST00000611342 1662 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.81□□□□□ -0.04
TIMP1P01033 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 AL591499.1-201ENST00000307155 1153 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 NOS2P3-201ENST00000411468 867 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 NOS2P2-201ENST00000426269 867 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 RN7SL2-201ENST00000490232 300 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms