Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RPL18AP8-201ENST00000486071 528 ntBASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ORAOV1P1-201ENST00000503108 395 ntBASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AP003398.1-201ENST00000531124 318 ntBASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 DNM1P30-201ENST00000563586 452 ntBASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 CICP16-201ENST00000502609 2813 ntBASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPA3F8WFD2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.83□□□□□ -0.35
NPIPA3F8WFD2 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPA3F8WFD2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPA3F8WFD2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.83□□□□□ -0.35
NPIPA3F8WFD2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 MIR645-201ENST00000385283 94 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 HERC2P11-201ENST00000562845 725 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC100756.2-201ENST00000569537 736 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 NUDT4P2-201ENST00000578341 546 ntBASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA3F8WFD2 AC084781.1-201ENST00000613737 656 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms