Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 RN7SL163P-201ENST00000583100 276 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 MIR6752-201ENST00000618442 71 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 FAM90A7P-201ENST00000382628 1395 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 FAM90A23P-201ENST00000400136 1395 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 XBP1P1-201ENST00000436573 652 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 OR2R1P-201ENST00000441404 914 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PFN1P12-201ENST00000455938 534 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AL008721.1-201ENST00000609964 604 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AC022748.3-201ENST00000621828 275 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 AC004923.1-202ENST00000642106 209 ntBASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HLA-DRB4X5D2U9 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms