Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AC074138.1-201ENST00000611182 1303 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AL139158.3-201ENST00000641212 1562 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AL512430.1-201ENST00000392575 860 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AC069218.1-201ENST00000435269 762 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 AL805961.1-201ENST00000642026 753 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.71■□□□□ 0.11
COL4A3BPQ9Y5P4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL4A3BPQ9Y5P4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AC067931.2-201ENST00000623655 2003 ntBASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AL627422.1-201ENST00000434104 580 ntBASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL4A3BPQ9Y5P4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms