Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC136621.1-201ENST00000624017 2304 ntBASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 MIR324-201ENST00000362183 83 ntBASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 LINC00592-201ENST00000549830 1044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AC006111.1-201ENST00000573982 329 ntTSL 3 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 RN7SL405P-201ENST00000582502 289 ntBASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 COQ5-202ENST00000445328 992 ntTSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 RN7SL614P-201ENST00000461850 280 ntBASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 AC104371.1-201ENST00000522077 797 ntBASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 SNRPCP5-201ENST00000531775 189 ntBASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIMBP3Q9UFD9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 RNA5SP358-201ENST00000362973 117 ntBASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 AL355994.4-201ENST00000416882 563 ntBASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 DYNLL1P2-201ENST00000554807 270 ntBASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 AC079328.2-201ENST00000561241 3354 ntBASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC20.97■□□□□ 0.95
RIMBP3Q9UFD9 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 GAGE12H-201ENST00000381722 527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 RPL36P20-201ENST00000423702 319 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AL138902.1-201ENST00000437965 856 ntTSL 3 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 AC116049.1-201ENST00000505282 385 ntBASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIMBP3Q9UFD9 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms