Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPSAP67-201ENST00000584105 862 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL589743.3-201ENST00000604121 517 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AZU1P1-201ENST00000603479 385 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 RPS9-213ENST00000626547 476 ntTSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC099795.2-201ENST00000639582 440 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 KRT41P-201ENST00000393988 1293 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 MBL3P-201ENST00000402234 644 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 TSACC-206ENST00000466306 477 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC091132.3-201ENST00000579701 470 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 AC138645.1-201ENST00000582765 470 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC12.63□□□□□ -0.39
CHD8Q9HCK8 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.63□□□□□ -0.39
CHD8Q9HCK8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AC008741.2-201ENST00000612792 3115 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AP000437.1-201ENST00000624057 2085 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 Z97653.2-201ENST00000623057 1418 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 FKBP4P1-201ENST00000507284 1347 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 RN7SKP245-201ENST00000364025 320 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 RNA5SP84-201ENST00000364740 107 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ALDOAP2-201ENST00000398050 1076 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms