Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM55Q9BYV6 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 BTBD6P1-201ENST00000412176 1267 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AL591846.1-201ENST00000451736 433 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AL008638.5-201ENST00000623814 1298 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AC132938.4-201ENST00000623835 848 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 AL359845.1-201ENST00000458202 1648 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 CES1P1-201ENST00000421606 1704 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 PCDHA6-201ENST00000378126 3267 ntBASIC14.32□□□□□ -0.12
TRIM55Q9BYV6 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 AL590440.2-201ENST00000641973 1595 ntBASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms