Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC093768.1-201ENST00000505987 2173 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC117500.1-201ENST00000497352 755 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC079905.2-201ENST00000550105 247 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AL121658.1-201ENST00000608489 712 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC069503.1-202ENST00000616576 642 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 HADH-212ENST00000638621 741 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC132825.8-201ENST00000640783 297 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 MATN2-201ENST00000254898 4106 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AP004607.4-201ENST00000530158 1459 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 TIGIT-201ENST00000383671 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 TGM5-202ENST00000349114 1958 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 GRAP2-201ENST00000344138 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 POP1-201ENST00000349693 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 THAP5-203ENST00000415914 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 KCTD21-AS1-207ENST00000600795 1549 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 FAM95B1-212ENST00000592873 4692 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 NFYC-212ENST00000440226 1717 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 COG1-210ENST00000618996 3369 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC015961.1-201ENST00000589715 2124 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PDPN-202ENST00000376057 2801 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SERBP1P1-201ENST00000396021 1160 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 UBE2V2P1-201ENST00000434717 398 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ECEL1P2-201ENST00000461596 1295 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC018797.2-201ENST00000501133 883 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC253576.1-201ENST00000511645 1156 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC024451.2-201ENST00000519856 1108 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC022784.5-201ENST00000522241 437 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AF213884.3-201ENST00000563833 479 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 CD7-202ENST00000578509 925 ntTSL 3 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 HLA-A-209ENST00000638375 975 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms