Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 AC027601.5-201ENST00000624065 2482 ntBASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 HSPA8P5-201ENST00000456928 2069 ntBASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 LINC00115-201ENST00000473798 1317 ntBASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 AC012617.1-204ENST00000586340 2305 ntBASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM48Q8IWZ4 AC073957.3-201ENST00000609998 6758 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 MIR557-201ENST00000385239 98 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AC006987.1-201ENST00000413610 527 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 OR8T1P-201ENST00000421347 918 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 NOC2LP1-201ENST00000450578 752 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 RN7SL190P-201ENST00000582519 257 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 SIGLEC18P-201ENST00000602271 909 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AC103691.2-201ENST00000618824 433 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AL590824.1-201ENST00000403828 1349 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 TEKT4P2-202ENST00000559466 1312 ntBASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM48Q8IWZ4 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms