Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AL355994.2-201ENST00000447882 704 ntBASIC12.6□□□□□ -0.39
LRRC28Q86X40 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AC004466.1-201ENST00000599515 1080 ntBASIC12.6□□□□□ -0.39
LRRC28Q86X40 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CLUHP2-201ENST00000426660 1303 ntBASIC12.6□□□□□ -0.39
LRRC28Q86X40 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 LINC02486-201ENST00000604157 3000 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AC004623.1-201ENST00000624592 2127 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 LINC01165-201ENST00000445190 1623 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 REXO1L6P-201ENST00000603433 1515 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 HOMER2P2-201ENST00000451621 847 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 COX5BP1-201ENST00000507622 393 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRRC28Q86X40 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 C2orf69P2-201ENST00000562032 1123 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 RN7SL560P-201ENST00000577943 264 ntBASIC12.59□□□□□ -0.39
LRRC28Q86X40 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.59□□□□□ -0.39
LRRC28Q86X40 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms