Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.42□□□□□ -0.1
SIX1Q15475 AL035252.4-201ENST00000624174 288 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 EGLN3-205ENST00000547327 2849 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 AF013593.1-201ENST00000458074 1487 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 RCC2P5-201ENST00000492126 1487 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 NRADDP-202ENST00000641269 1585 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 SBF1P1-201ENST00000444527 5631 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 BX679664.3-201ENST00000414070 555 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 GAPDHP21-201ENST00000450301 1010 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 AC113935.1-201ENST00000471722 555 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.41□□□□□ -0.1
SIX1Q15475 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.41□□□□□ -0.1
SIX1Q15475 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.41□□□□□ -0.1
SIX1Q15475 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 RN7SL163P-201ENST00000583100 276 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 MIR3188-201ENST00000583494 85 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.41□□□□□ -0.1
SIX1Q15475 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SIX1Q15475 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 HSPA8P9-201ENST00000485881 1943 ntBASIC14.41□□□□□ -0.1
SIX1Q15475 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX1Q15475 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX1Q15475 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX1Q15475 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX1Q15475 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX1Q15475 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX1Q15475 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX1Q15475 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SIX1Q15475 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX1Q15475 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX1Q15475 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
SIX1Q15475 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SIX1Q15475 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX1Q15475 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SIX1Q15475 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX1Q15475 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SIX1Q15475 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms