Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAE1P78406 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.29□□□□□ -0.28
RAE1P78406 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.29□□□□□ -0.28
RAE1P78406 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.29□□□□□ -0.28
RAE1P78406 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAE1P78406 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.29□□□□□ -0.28
RAE1P78406 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 MIR4538-201ENST00000581377 78 ntBASIC13.29□□□□□ -0.28
RAE1P78406 AL356740.1-201ENST00000602192 1297 ntBASIC13.29□□□□□ -0.28
RAE1P78406 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 AC026271.4-201ENST00000578214 1833 ntBASIC13.29□□□□□ -0.28
RAE1P78406 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.29□□□□□ -0.28
RAE1P78406 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.29□□□□□ -0.28
RAE1P78406 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAE1P78406 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 NRADDP-202ENST00000641269 1585 ntBASIC13.28□□□□□ -0.28
RAE1P78406 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.28□□□□□ -0.28
RAE1P78406 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 FAM86MP-201ENST00000340703 885 ntBASIC13.28□□□□□ -0.28
RAE1P78406 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 BANF1P3-201ENST00000412556 261 ntBASIC13.28□□□□□ -0.28
RAE1P78406 ACTG1P2-201ENST00000415776 1125 ntBASIC13.28□□□□□ -0.28
RAE1P78406 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 ACTG1P11-201ENST00000425411 1125 ntBASIC13.28□□□□□ -0.28
RAE1P78406 ISCA2P1-201ENST00000425548 448 ntBASIC13.28□□□□□ -0.28
RAE1P78406 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 AP001258.2-201ENST00000529891 490 ntBASIC13.28□□□□□ -0.28
RAE1P78406 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.28□□□□□ -0.28
RAE1P78406 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.28□□□□□ -0.28
RAE1P78406 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 AL133467.4-201ENST00000602953 725 ntBASIC13.28□□□□□ -0.28
RAE1P78406 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 AC245140.2-201ENST00000624054 1939 ntBASIC13.28□□□□□ -0.28
RAE1P78406 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 AC073862.5-201ENST00000624129 2027 ntBASIC13.28□□□□□ -0.28
RAE1P78406 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms