Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.17□□□□□ -0.46
ACTBP60709 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ACTBP60709 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACTBP60709 VENTXP1-201ENST00000569334 2716 ntBASIC12.17□□□□□ -0.46
ACTBP60709 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 SALL4P6-201ENST00000429385 1691 ntBASIC12.16□□□□□ -0.46
ACTBP60709 AC131902.2-201ENST00000566892 2172 ntBASIC12.16□□□□□ -0.46
ACTBP60709 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ACTBP60709 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 AC003958.1-201ENST00000435883 421 ntBASIC12.16□□□□□ -0.46
ACTBP60709 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 AL035414.1-201ENST00000451327 857 ntBASIC12.16□□□□□ -0.46
ACTBP60709 AC093433.1-201ENST00000458048 571 ntBASIC12.16□□□□□ -0.46
ACTBP60709 RN7SL752P-201ENST00000463779 287 ntBASIC12.16□□□□□ -0.46
ACTBP60709 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 AC011495.1-201ENST00000498085 584 ntBASIC12.16□□□□□ -0.46
ACTBP60709 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.16□□□□□ -0.46
ACTBP60709 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.16□□□□□ -0.46
ACTBP60709 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.16□□□□□ -0.46
ACTBP60709 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
ACTBP60709 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.16□□□□□ -0.46
ACTBP60709 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 AC025048.6-201ENST00000634326 1161 ntBASIC12.16□□□□□ -0.46
ACTBP60709 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 POM121L4P-202ENST00000427789 1891 ntBASIC12.16□□□□□ -0.46
ACTBP60709 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.16□□□□□ -0.46
ACTBP60709 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ACTBP60709 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACTBP60709 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.15□□□□□ -0.46
ACTBP60709 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
ACTBP60709 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
ACTBP60709 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.15□□□□□ -0.46
ACTBP60709 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ACTBP60709 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ACTBP60709 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.15□□□□□ -0.46
ACTBP60709 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACTBP60709 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms