Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC244394.1-201ENST00000435000 1665 ntBASIC13.16□□□□□ -0.3
PER3P56645 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 AC018463.1-201ENST00000456674 917 ntBASIC13.16□□□□□ -0.3
PER3P56645 SCARNA21-201ENST00000517026 139 ntBASIC13.16□□□□□ -0.3
PER3P56645 IGHV3-37-201ENST00000518544 340 ntBASIC13.16□□□□□ -0.3
PER3P56645 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.16□□□□□ -0.3
PER3P56645 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.16□□□□□ -0.3
PER3P56645 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.16□□□□□ -0.3
PER3P56645 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.16□□□□□ -0.3
PER3P56645 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.16□□□□□ -0.3
PER3P56645 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.16□□□□□ -0.3
PER3P56645 AC027601.3-201ENST00000622907 509 ntBASIC13.16□□□□□ -0.3
PER3P56645 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.16□□□□□ -0.3
PER3P56645 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 FAM90A7P-201ENST00000382628 1395 ntBASIC13.16□□□□□ -0.3
PER3P56645 FAM90A23P-201ENST00000400136 1395 ntBASIC13.16□□□□□ -0.3
PER3P56645 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 CAP2P1-201ENST00000557743 1390 ntBASIC13.16□□□□□ -0.3
PER3P56645 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
PER3P56645 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
PER3P56645 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
PER3P56645 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.15□□□□□ -0.3
PER3P56645 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 Z69890.1-201ENST00000382990 339 ntBASIC13.15□□□□□ -0.3
PER3P56645 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 AP000358.1-201ENST00000456260 156 ntBASIC13.15□□□□□ -0.3
PER3P56645 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.15□□□□□ -0.3
PER3P56645 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
PER3P56645 AC005962.1-201ENST00000584100 773 ntBASIC13.15□□□□□ -0.3
PER3P56645 AL109837.1-201ENST00000603272 613 ntBASIC13.15□□□□□ -0.3
PER3P56645 AC007881.3-201ENST00000608897 607 ntBASIC13.15□□□□□ -0.3
PER3P56645 MIR6720-201ENST00000611664 98 ntBASIC13.15□□□□□ -0.3
PER3P56645 YRDCP1-201ENST00000621419 643 ntBASIC13.15□□□□□ -0.3
PER3P56645 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.15□□□□□ -0.3
PER3P56645 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PER3P56645 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.15□□□□□ -0.3
PER3P56645 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms