Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.45■□□□□ 0.22
NEDD4P46934 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 HERC2P11-201ENST00000562845 725 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 AC100756.2-201ENST00000569537 736 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 AC007952.4-201ENST00000573866 637 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 AC073352.2-201ENST00000609385 439 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 CR383656.2-201ENST00000548656 2254 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NEDD4P46934 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 NFIC-211ENST00000641145 8399 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEDD4P46934 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 AC078991.1-201ENST00000437297 610 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.44■□□□□ 0.22
NEDD4P46934 STK24P1-201ENST00000455035 1291 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 RN7SL181P-201ENST00000462921 277 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.44■□□□□ 0.22
NEDD4P46934 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.44■□□□□ 0.22
NEDD4P46934 AP005264.5-201ENST00000590066 467 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 MIR6842-201ENST00000612539 65 ntBASIC16.44■□□□□ 0.22
NEDD4P46934 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.44■□□□□ 0.22
NEDD4P46934 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 AC099521.3-201ENST00000624251 2938 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 DGCR9-201ENST00000609630 2415 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 AC020658.7-201ENST00000624274 2442 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.43■□□□□ 0.22
NEDD4P46934 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
NEDD4P46934 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 TCAF1P1-201ENST00000414990 2232 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 RPL18AP3-201ENST00000462885 528 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.43■□□□□ 0.22
NEDD4P46934 TMCO5B-205ENST00000530020 894 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NEDD4P46934 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
NEDD4P46934 MIR3180-2-201ENST00000581748 88 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 AC092171.5-201ENST00000608012 942 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms