Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL589743.3-201ENST00000604121 517 ntBASIC15.09■□□□□ 0.01
HTTP42858 PTMAP5-202ENST00000607242 1162 ntBASIC15.09■□□□□ 0.01
HTTP42858 RN7SL827P-201ENST00000607480 288 ntBASIC15.09■□□□□ 0.01
HTTP42858 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 FKBP4P1-201ENST00000507284 1347 ntBASIC15.09■□□□□ 0.01
HTTP42858 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 AC023157.3-201ENST00000619086 2088 ntBASIC15.09■□□□□ 0.01
HTTP42858 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC15.09■□□□□ 0.01
HTTP42858 SNORA50D-201ENST00000408059 134 ntBASIC15.09■□□□□ 0.01
HTTP42858 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC15.09■□□□□ 0.01
HTTP42858 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.09■□□□□ 0.01
HTTP42858 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 TPI1P2-201ENST00000491343 752 ntBASIC15.09■□□□□ 0.01
HTTP42858 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 CALM3-206ENST00000594523 540 ntTSL 4 BASIC15.09■□□□□ 0.01
HTTP42858 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.08■□□□□ 0.01
HTTP42858 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HTTP42858 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.08■□□□□ 0.01
HTTP42858 TPI1P3-201ENST00000335020 740 ntBASIC15.08■□□□□ 0.01
HTTP42858 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC15.08■□□□□ 0.01
HTTP42858 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC15.08■□□□□ 0.01
HTTP42858 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC15.08■□□□□ 0.01
HTTP42858 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC15.08■□□□□ 0.01
HTTP42858 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC15.08■□□□□ 0.01
HTTP42858 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC15.08■□□□□ 0.01
HTTP42858 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.08■□□□□ 0.01
HTTP42858 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HTTP42858 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.08■□□□□ 0
HTTP42858 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC15.08■□□□□ 0
HTTP42858 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HTTP42858 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 ELOBP2-201ENST00000526184 355 ntBASIC15.08■□□□□ 0
HTTP42858 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
HTTP42858 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 MBL3P-201ENST00000402234 644 ntBASIC15.08■□□□□ 0
HTTP42858 HMGA1P1-201ENST00000415560 1062 ntBASIC15.08■□□□□ 0
HTTP42858 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC15.08■□□□□ 0
HTTP42858 AC010395.2-201ENST00000509899 904 ntBASIC15.08■□□□□ 0
HTTP42858 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC15.08■□□□□ 0
HTTP42858 SNORD55-201ENST00000581525 80 ntBASIC15.08■□□□□ 0
HTTP42858 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC15.08■□□□□ 0
HTTP42858 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC15.08■□□□□ 0
HTTP42858 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC15.08■□□□□ 0
HTTP42858 AC080038.2-201ENST00000617734 423 ntBASIC15.08■□□□□ 0
HTTP42858 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC15.07■□□□□ 0
HTTP42858 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.07■□□□□ 0
HTTP42858 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC15.07■□□□□ 0
HTTP42858 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.07■□□□□ 0
HTTP42858 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.07■□□□□ 0
HTTP42858 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC15.07■□□□□ 0
HTTP42858 RN7SL483P-201ENST00000478417 285 ntBASIC15.07■□□□□ 0
HTTP42858 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms