Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 AC078814.4-201ENST00000546650 327 ntBASIC13.14□□□□□ -0.31
CCL4P13236 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 MIR5001-201ENST00000580185 100 ntBASIC13.14□□□□□ -0.31
CCL4P13236 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 NAV1-210ENST00000593583 726 ntBASIC13.14□□□□□ -0.31
CCL4P13236 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 RCC2P1-201ENST00000452257 1476 ntBASIC13.14□□□□□ -0.31
CCL4P13236 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 AC008620.2-201ENST00000510294 1569 ntBASIC13.14□□□□□ -0.31
CCL4P13236 SALL4P6-201ENST00000429385 1691 ntBASIC13.14□□□□□ -0.31
CCL4P13236 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 OR10N1P-201ENST00000392758 869 ntBASIC13.13□□□□□ -0.31
CCL4P13236 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 TBC1D3P6-201ENST00000505954 962 ntBASIC13.13□□□□□ -0.31
CCL4P13236 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL4P13236 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL4P13236 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCL4P13236 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL4P13236 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CCL4P13236 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 LINC00552-201ENST00000625151 2579 ntBASIC13.13□□□□□ -0.31
CCL4P13236 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL4P13236 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL4P13236 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.12□□□□□ -0.31
CCL4P13236 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms