Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.58■□□□□ 0.09
TPM1P09493 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TPM1P09493 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.09
TPM1P09493 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 AC112492.5-201ENST00000421897 457 ntBASIC15.58■□□□□ 0.08
TPM1P09493 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM1P09493 FAM207CP-201ENST00000443486 507 ntBASIC15.58■□□□□ 0.08
TPM1P09493 TSPY16P-201ENST00000449843 468 ntBASIC15.58■□□□□ 0.08
TPM1P09493 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM1P09493 COX5BP1-201ENST00000507622 393 ntBASIC15.58■□□□□ 0.08
TPM1P09493 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM1P09493 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM1P09493 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.58■□□□□ 0.08
TPM1P09493 AL358472.3-201ENST00000608147 415 ntBASIC15.58■□□□□ 0.08
TPM1P09493 AL136301.1-201ENST00000615830 422 ntBASIC15.58■□□□□ 0.08
TPM1P09493 RPSAP52-203ENST00000622976 1023 ntBASIC15.58■□□□□ 0.08
TPM1P09493 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM1P09493 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 AC010970.1-201ENST00000445125 1848 ntBASIC15.58■□□□□ 0.08
TPM1P09493 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TPM1P09493 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM1P09493 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 AC005014.1-201ENST00000432006 2976 ntBASIC15.58■□□□□ 0.08
TPM1P09493 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM1P09493 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 RCC2P1-201ENST00000452257 1476 ntBASIC15.58■□□□□ 0.08
TPM1P09493 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 PCDHA6-201ENST00000378126 3267 ntBASIC15.58■□□□□ 0.08
TPM1P09493 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM1P09493 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM1P09493 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM1P09493 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 CICP1-201ENST00000416803 2410 ntBASIC15.57■□□□□ 0.08
TPM1P09493 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
TPM1P09493 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM1P09493 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TPM1P09493 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.57■□□□□ 0.08
TPM1P09493 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.57■□□□□ 0.08
TPM1P09493 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 WASH4P-201ENST00000564273 1246 ntBASIC15.57■□□□□ 0.08
TPM1P09493 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM1P09493 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
TPM1P09493 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.57■□□□□ 0.08
TPM1P09493 AJ011932.1-201ENST00000621707 465 ntBASIC15.57■□□□□ 0.08
TPM1P09493 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM1P09493 AL358781.1-202ENST00000321081 1360 ntBASIC15.57■□□□□ 0.08
TPM1P09493 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TPM1P09493 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms