Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPNS1P04632 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CAPNS1P04632 MME-218ENST00000625667 363 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPNS1P04632 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPNS1P04632 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CAPNS1P04632 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPNS1P04632 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CAPNS1P04632 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPNS1P04632 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CAPNS1P04632 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPNS1P04632 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CAPNS1P04632 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CAPNS1P04632 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.02□□□□□ -0.16
CAPNS1P04632 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPNS1P04632 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPNS1P04632 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPNS1P04632 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPNS1P04632 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPNS1P04632 KRT8P31-201ENST00000504812 1408 ntBASIC14.02□□□□□ -0.16
CAPNS1P04632 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC093909.3-201ENST00000504783 336 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPNS1P04632 FAM86B3P-203ENST00000523992 854 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPNS1P04632 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC005962.1-201ENST00000584100 773 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC138696.2-201ENST00000607376 223 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CAPNS1P04632 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC118758.2-201ENST00000614242 2813 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPNS1P04632 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPNS1P04632 AC135782.3-201ENST00000562782 2105 ntBASIC14.02□□□□□ -0.17
CAPNS1P04632 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPNS1P04632 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CAPNS1P04632 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAPNS1P04632 AC015909.3-201ENST00000572855 1794 ntBASIC14.01□□□□□ -0.17
CAPNS1P04632 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
CAPNS1P04632 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 LINC01815-202ENST00000641468 1409 ntBASIC14.01□□□□□ -0.17
CAPNS1P04632 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CAPNS1P04632 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPNS1P04632 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CAPNS1P04632 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CAPNS1P04632 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPNS1P04632 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms