Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC1P02654 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 AL354877.1-201ENST00000424412 413 ntBASIC12.55□□□□□ -0.4
APOC1P02654 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 COX20P2-201ENST00000452636 358 ntBASIC12.55□□□□□ -0.4
APOC1P02654 TUBB8P8-201ENST00000458717 1058 ntBASIC12.55□□□□□ -0.4
APOC1P02654 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 AC022217.1-201ENST00000521069 738 ntBASIC12.55□□□□□ -0.4
APOC1P02654 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 KRT17P8-201ENST00000540749 863 ntBASIC12.55□□□□□ -0.4
APOC1P02654 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC1P02654 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC1P02654 EEF1DP1-201ENST00000585891 896 ntBASIC12.55□□□□□ -0.4
APOC1P02654 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC1P02654 AC012645.4-201ENST00000610691 1061 ntBASIC12.55□□□□□ -0.4
APOC1P02654 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC1P02654 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
APOC1P02654 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 AC007952.5-201ENST00000572818 1486 ntBASIC12.54□□□□□ -0.4
APOC1P02654 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 AC099521.2-201ENST00000619354 2036 ntBASIC12.54□□□□□ -0.4
APOC1P02654 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.54□□□□□ -0.4
APOC1P02654 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.54□□□□□ -0.4
APOC1P02654 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 AC026954.1-201ENST00000429771 1293 ntBASIC12.54□□□□□ -0.4
APOC1P02654 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.54□□□□□ -0.4
APOC1P02654 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.54□□□□□ -0.4
APOC1P02654 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.54□□□□□ -0.4
APOC1P02654 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.54□□□□□ -0.4
APOC1P02654 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
APOC1P02654 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 DUX4L45-201ENST00000566406 1057 ntBASIC12.54□□□□□ -0.4
APOC1P02654 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.54□□□□□ -0.4
APOC1P02654 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 CR392039.2-201ENST00000623182 509 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms