Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RPS2P36-201ENST00000456516 831 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 RPL18AP3-201ENST00000462885 528 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.6□□□□□ -0.39
ZIC3O60481 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.6□□□□□ -0.39
ZIC3O60481 RN7SL190P-201ENST00000582519 257 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 AC005041.3-201ENST00000606287 649 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 AP000322.3-201ENST00000608665 388 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 AL359091.4-201ENST00000610052 409 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 COX6A1P2-201ENST00000620597 330 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.6□□□□□ -0.39
ZIC3O60481 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 SALL4P6-201ENST00000429385 1691 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.6□□□□□ -0.39
ZIC3O60481 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 NRADDP-202ENST00000641269 1585 ntBASIC12.6□□□□□ -0.39
ZIC3O60481 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZIC3O60481 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZIC3O60481 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 RNVU1-8-201ENST00000364272 125 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 RN7SKP109-201ENST00000410592 316 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 OR52M2P-201ENST00000414298 959 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 EEF1DP2-201ENST00000433698 843 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.59□□□□□ -0.39
ZIC3O60481 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.59□□□□□ -0.39
ZIC3O60481 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 TMCO5B-205ENST00000530020 894 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 AC068867.1-201ENST00000559855 150 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.59□□□□□ -0.39
ZIC3O60481 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 MIR4326-201ENST00000582203 59 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 RN7SL470P-201ENST00000583069 259 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 SPCS2P2-201ENST00000603270 608 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 AL009176.1-201ENST00000607876 650 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 AC107464.3-201ENST00000609172 737 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ZIC3O60481 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 AL161773.1-201ENST00000624845 863 ntBASIC12.59□□□□□ -0.39
ZIC3O60481 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.59□□□□□ -0.39
ZIC3O60481 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
ZIC3O60481 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZIC3O60481 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
ZIC3O60481 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZIC3O60481 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.58□□□□□ -0.39
ZIC3O60481 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms