Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC78A2IDD5 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC78A2IDD5 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ACTBP11-201ENST00000436287 1126 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 PFN1P12-201ENST00000455938 534 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 MIR4525-201ENST00000580000 75 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 RN7SL163P-201ENST00000583100 276 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 GPR182-203ENST00000622922 591 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AC073548.1-201ENST00000624088 1882 ntBASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC78A2IDD5 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 PPT1-213ENST00000641319 2388 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 NKAIN1P1-201ENST00000435754 582 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AC106794.1-201ENST00000506935 792 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 FAM8A2P-201ENST00000528813 1142 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AL118558.3-201ENST00000607414 1079 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AL157813.1-201ENST00000612996 587 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms