Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 RN7SL219P-201ENST00000582872 296 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 BNIP3P29-201ENST00000598302 571 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC011447.5-201ENST00000616168 564 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 E2F3P2-201ENST00000447755 1422 ntBASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC00474Q9P2X8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 FAM95B1-212ENST00000592873 4692 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 RN7SL832P-201ENST00000607781 1756 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC244394.1-201ENST00000435000 1665 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC011481.3-201ENST00000623895 5594 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 LAP3P2-201ENST00000454686 1454 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AL161932.2-201ENST00000435436 679 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC004898.1-201ENST00000451057 766 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC126915.1-201ENST00000522847 1038 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC008805.1-201ENST00000590892 364 ntBASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC9.3□□□□□ -0.92
LINC00474Q9P2X8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms